Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3344 | Not Available | Negative | 3648277 - 3648468 | 7464.91 |
| hypothetical protein | M099_3345 | Not Available | Negative | 3648527 - 3648868 | 13614.4 |
| his kinase a domain protein | M099_3346 | Not Available | Negative | 3649199 - 3653239 | 153033.0 |
| hypothetical protein | M099_3347 | Not Available | Positive | 3653453 - 3654952 | 56154.5 |
| tonb-linked outer membrane, susc/raga family protein | M099_3348 | Not Available | Positive | 3654975 - 3658013 | 112371.0 |
| starch-binding associating with outer membrane family protein | M099_3349 | Not Available | Positive | 3658031 - 3659689 | 63057.9 |
| o-glycosyl hydrolase 30 family protein | M099_3350 | Not Available | Positive | 3659806 - 3661404 | 59513.4 |
| glycoside hydrolase family 5 | M099_3351 | Not Available | Positive | 3661417 - 3662982 | 59563.2 |
| bacterial regulatory s, laci family protein | M099_3352 | Not Available | Negative | 3663063 - 3664085 | 38256.6 |
| alkyl hydroperoxide reductase subunit f | M099_3353 | Not Available | Negative | 3664225 - 3665775 | 55958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

