Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin-a associated anchor s mfa1 and mfa2 family protein | M099_3314 | Not Available | Positive | 3621277 - 3622161 | 33740.9 |
| phage integrase family protein | M099_3315 | Not Available | Positive | 3622245 - 3623186 | 36543.2 |
| undecaprenyl-phosphate glucose phosphotransferase | M099_3316 | Not Available | Positive | 3623627 - 3625030 | 54484.1 |
| polysaccharide biosynthesis/export family protein | M099_3317 | Not Available | Positive | 3625078 - 3625869 | 28967.2 |
| capsular exopolysaccharide family domain protein | M099_3318 | Not Available | Positive | 3625878 - 3628289 | 89841.9 |
| n-acetylmuramoyl-l-alanine amidase family protein | M099_3319 | Not Available | Negative | 3628398 - 3628847 | 16921.3 |
| putative membrane protein | M099_3320 | Not Available | Negative | 3628844 - 3628972 | 4386.62 |
| dna-binding family protein | M099_3321 | Not Available | Negative | 3628988 - 3629416 | 15564.9 |
| hypothetical protein | M099_3322 | Not Available | Positive | 3629665 - 3629895 | 8949.8 |
| vire n-terminal domain protein | M099_3323 | Not Available | Negative | 3630046 - 3632364 | 87687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

