Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 2, sugar binding domain protein | M099_3304 | Not Available | Negative | 3606633 - 3610913 | 162334.0 |
| helix-turn-helix family protein | M099_3305 | Not Available | Negative | 3611002 - 3611304 | 11061.2 |
| hypothetical protein | M099_3306 | Not Available | Positive | 3611546 - 3611665 | 4660.85 |
| hypothetical protein | M099_3307 | Not Available | Negative | 3611763 - 3614459 | 101373.0 |
| phage integrase family protein | M099_3308 | Not Available | Positive | 3614625 - 3615593 | 37409.4 |
| hypothetical protein | M099_3309 | Not Available | Positive | 3615973 - 3616506 | 19928.7 |
| hypothetical protein | M099_3310 | Not Available | Positive | 3616655 - 3617629 | 35961.6 |
| hypothetical protein | M099_3311 | Not Available | Positive | 3617633 - 3618205 | 21537.8 |
| hypothetical protein | M099_3312 | Not Available | Positive | 3618212 - 3619621 | 54370.8 |
| major fimbrial subunit family protein | M099_3313 | Not Available | Positive | 3619652 - 3621190 | 55438.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

