Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate transporter family protein | M099_0303 | Not Available | Positive | 332163 - 332960 | 28569.7 |
| short chain dehydrogenase family protein | M099_0304 | Not Available | Negative | 333068 - 333928 | 31842.1 |
| flavin oxidoreductase / nadh oxidase family protein | M099_0305 | Not Available | Negative | 333925 - 335148 | 45522.3 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | M099_0306 | Not Available | Negative | 335211 - 335975 | 29466.6 |
| aaa atpase domain protein | M099_0307 | Not Available | Negative | 336380 - 337783 | 53381.3 |
| d12 class n6 adenine-specific dna methyltransferase family protein | M099_0308 | Not Available | Negative | 337942 - 338802 | 32758.9 |
| hypothetical protein | M099_0309 | Not Available | Negative | 338807 - 340099 | 48903.3 |
| putative integrase protein | M099_0310 | Not Available | Negative | 340414 - 341511 | 42468.7 |
| hypothetical protein | M099_0311 | Not Available | Negative | 341654 - 341767 | 4302.41 |
| acetyltransferase family protein | M099_0312 | Not Available | Positive | 341971 - 342372 | 15520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

