Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3562588 - 3562661 | Not Available |
| abgt transporter family protein | M099_3275 | Not Available | Negative | 3562731 - 3563447 | 26926.7 |
| response regulator | M099_3276 | Not Available | Negative | 3563437 - 3564165 | 27616.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase family protein | M099_3277 | Not Available | Negative | 3564195 - 3568592 | 168904.0 |
| histone h1-like hc1 family protein | M099_3278 | Not Available | Negative | 3568741 - 3568983 | 9308.52 |
| transporter, lactate permease family protein | M099_3279 | Not Available | Negative | 3569084 - 3570583 | 53110.7 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | M099_3280 | Not Available | Negative | 3570845 - 3572131 | 46224.8 |
| hypothetical protein | M099_3281 | Not Available | Negative | 3572399 - 3572887 | 17879.0 |
| tonb dependent receptor family protein | M099_3282 | Not Available | Negative | 3572884 - 3575043 | 82018.8 |
| hypothetical protein | M099_3283 | Not Available | Negative | 3575092 - 3575346 | 9667.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

