Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | M099_3264 | Not Available | Negative | 3556666 - 3557601 | 36546.9 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_3265 | Not Available | Negative | 3557656 - 3558228 | 22961.8 |
| hypothetical protein | M099_3266 | Not Available | Positive | 3558234 - 3558575 | 13614.4 |
| transposase family protein | M099_3267 | Not Available | Positive | 3558634 - 3559067 | 16889.4 |
| toxin-antitoxin system, toxin component, rele family | M099_3268 | Not Available | Negative | 3559207 - 3559428 | 7863.59 |
| transposase family protein | M099_3269 | Not Available | Positive | 3559753 - 3560037 | 11118.5 |
| mechanosensitive ion channel family protein | M099_3270 | Not Available | Negative | 3560344 - 3561693 | 50738.6 |
| hypothetical protein | M099_3271 | Not Available | Negative | 3561707 - 3561823 | 4557.51 |
| glycoside hydrolase, family 28 domain protein | M099_3272 | Not Available | Negative | 3561860 - 3562183 | 12100.8 |
| hypothetical protein | M099_3273 | Not Available | Negative | 3562177 - 3562380 | 7596.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

