Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3254 | Not Available | Positive | 3539659 - 3539868 | 7878.6 |
| respiratory-chain nadh dehydrogenase 24 kd subunit | M099_3255 | Not Available | Negative | 3540147 - 3540380 | 8542.73 |
| hypothetical protein | M099_3256 | Not Available | Positive | 3540453 - 3540662 | 7826.78 |
| hypothetical protein | M099_3257 | Not Available | Negative | 3540695 - 3542245 | 54947.7 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_3258 | Not Available | Negative | 3542527 - 3544125 | 60884.1 |
| glycosyl hydrolases family 2, sugar binding domain protein | M099_3259 | Not Available | Negative | 3544240 - 3546918 | 101256.0 |
| glycosyl hydrolase family 20, catalytic domain protein | M099_3260 | Not Available | Negative | 3546981 - 3549062 | 80552.9 |
| glycoside hydrolase family 2, candidate beta-glycosidase | M099_3261 | Not Available | Negative | 3549059 - 3551506 | 92763.4 |
| putative outer membrane protein, probably involved in nutrient binding protein | M099_3262 | Not Available | Negative | 3551605 - 3553146 | 59338.3 |
| tonb-linked outer membrane, susc/raga family protein | M099_3263 | Not Available | Negative | 3553160 - 3556444 | 121454.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

