Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dtdp-4-dehydrorhamnose 3,5-epimerase | M099_3234 | Not Available | Negative | 3519516 - 3519947 | 16064.2 |
| cdp-glucose 4,6-dehydratase | M099_3235 | Not Available | Negative | 3519947 - 3521047 | 41174.9 |
| glucose-1-phosphate cytidylyltransferase | M099_3236 | Not Available | Negative | 3521067 - 3521840 | 29520.3 |
| hypothetical protein | M099_3237 | Not Available | Negative | 3522013 - 3522341 | 13073.6 |
| hypothetical protein | M099_3238 | Not Available | Positive | 3522360 - 3522509 | 5707.74 |
| cobq/cobb/mind/para nucleotide binding domain protein | M099_3239 | Not Available | Positive | 3522529 - 3523152 | 23398.3 |
| hypothetical protein | M099_3240 | Not Available | Positive | 3523211 - 3523645 | 16438.6 |
| hypothetical protein | M099_3241 | Not Available | Positive | 3523689 - 3524030 | 13026.1 |
| hypothetical protein | M099_3242 | Not Available | Positive | 3524107 - 3524364 | 8878.07 |
| hypothetical protein | M099_3243 | Not Available | Negative | 3524569 - 3525927 | 53151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

