Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase 4 family protein | M099_3214 | Not Available | Negative | 3500913 - 3502019 | 40967.8 |
| glycosyltransferase like 2 family protein | M099_3215 | Not Available | Negative | 3502030 - 3502629 | 24183.5 |
| transposase dde domain protein | M099_3216 | Not Available | Negative | 3502707 - 3503612 | 35030.2 |
| glycosyltransferase family 2 domain protein | M099_3217 | Not Available | Negative | 3503719 - 3503886 | 6348.59 |
| core-2/i-branching enzyme family protein | M099_3218 | Not Available | Negative | 3503934 - 3504785 | 33780.8 |
| transposase is66 family protein | M099_3219 | Not Available | Negative | 3505009 - 3505482 | 18361.6 |
| transposase is66 family protein | M099_3220 | Not Available | Negative | 3505494 - 3506801 | 50424.7 |
| putative transposase | M099_3221 | Not Available | Negative | 3506874 - 3507209 | 13386.4 |
| hypothetical protein | M099_3222 | Not Available | Positive | 3507382 - 3507579 | 7679.66 |
| glycosyl transferases group 1 family protein | M099_3223 | Not Available | Negative | 3508221 - 3509333 | 43356.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

