Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase alpha/beta chain, c terminal domain protein | M099_3194 | Not Available | Positive | 3478622 - 3480376 | 65785.3 |
| atp synthase alpha/beta family, beta-barrel domain protein | M099_3195 | Not Available | Positive | 3480412 - 3481734 | 48182.8 |
| atp synthase subunit d family protein | M099_3196 | Not Available | Positive | 3481749 - 3482354 | 23447.8 |
| v-type atpase subunit i family protein | M099_3197 | Not Available | Positive | 3482351 - 3484156 | 67293.5 |
| atp synthase subunit c family protein | M099_3198 | Not Available | Positive | 3484376 - 3484834 | 15160.8 |
| glycosyl transferases group 1 family protein | M099_3199 | Not Available | Positive | 3485089 - 3486759 | 63540.8 |
| alpha-glucan phosphorylases family protein | M099_3200 | Not Available | Positive | 3486788 - 3489352 | 98180.8 |
| hypothetical protein | M099_3201 | Not Available | Negative | 3489379 - 3489492 | 4412.2 |
| ahpc/tsa family protein | M099_3202 | Not Available | Negative | 3489579 - 3490697 | 41334.4 |
| hypothetical protein | M099_3203 | Not Available | Positive | 3490921 - 3491046 | 4938.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

