Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yopx family protein | M099_3122 | Not Available | Negative | 3434914 - 3435390 | 18240.9 |
| hypothetical protein | M099_3123 | Not Available | Negative | 3436180 - 3436530 | 13511.2 |
| hypothetical protein | M099_3124 | Not Available | Negative | 3436543 - 3436746 | 7577.38 |
| hypothetical protein | M099_3125 | Not Available | Negative | 3436948 - 3437100 | 6099.35 |
| hypothetical protein | M099_3126 | Not Available | Negative | 3437143 - 3437352 | 7755.15 |
| hypothetical protein | M099_3127 | Not Available | Negative | 3437392 - 3437628 | 9027.34 |
| peptidase m48 family protein | M099_3128 | Not Available | Positive | 3438038 - 3438823 | 28354.4 |
| addiction module antidote protein, higa family | M099_3129 | Not Available | Negative | 3438969 - 3439313 | 12991.2 |
| plasmid maintenance system killer family protein | M099_3130 | Not Available | Negative | 3439320 - 3439637 | 12365.8 |
| hypothetical protein | M099_3131 | Not Available | Negative | 3439821 - 3440138 | 11775.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

