Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding regulatory, yebc/pmpr family protein | M099_3112 | Not Available | Positive | 3430638 - 3431324 | 25617.0 |
| tscpd domain protein | M099_3113 | Not Available | Positive | 3431326 - 3431571 | 9080.04 |
| hypothetical protein | M099_3114 | Not Available | Negative | 3431687 - 3432253 | 21212.6 |
| homeo-like domain protein | M099_3115 | Not Available | Negative | 3432329 - 3432650 | 12703.6 |
| helix-turn-helix family protein | M099_3116 | Not Available | Negative | 3432792 - 3433103 | 12199.7 |
| hypothetical protein | M099_3117 | Not Available | Negative | 3433100 - 3433465 | 14144.1 |
| hypothetical protein | M099_3118 | Not Available | Negative | 3433479 - 3433766 | 10892.2 |
| hypothetical protein | M099_3119 | Not Available | Negative | 3434124 - 3434324 | 7482.0 |
| dpnd/pcfm-like family protein | M099_3120 | Not Available | Negative | 3434314 - 3434490 | 6887.99 |
| hypothetical protein | M099_3121 | Not Available | Negative | 3434496 - 3434906 | 15656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

