Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase 11 family protein | M099_3092 | Not Available | Negative | 3408269 - 3408940 | 26774.8 |
| glycosyl transferase 2 family protein | M099_3093 | Not Available | Negative | 3408948 - 3409763 | 31005.6 |
| polysaccharide biosynthesis family protein | M099_3094 | Not Available | Negative | 3409777 - 3411144 | 51207.4 |
| hypothetical protein | M099_3095 | Not Available | Positive | 3411397 - 3411591 | 7552.16 |
| hypothetical protein | M099_3096 | Not Available | Negative | 3411777 - 3412142 | 14105.1 |
| transcription termination factor nusg family protein | M099_3097 | Not Available | Negative | 3412243 - 3412791 | 21158.1 |
| hypothetical protein | M099_3098 | Not Available | Negative | 3413785 - 3414201 | 16026.2 |
| hypothetical protein | M099_3099 | Not Available | Negative | 3414173 - 3414331 | 6515.15 |
| hypothetical protein | M099_3100 | Not Available | Positive | 3414402 - 3414515 | 4486.53 |
| helix-turn-helix family protein | M099_3101 | Not Available | Positive | 3414512 - 3414940 | 15954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

