Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | M099_3082 | Not Available | Positive | 3400386 - 3401504 | 43299.0 |
| helicase domain protein | M099_3083 | Not Available | Positive | 3401678 - 3402225 | 20933.1 |
| putative is1272 transposase | M099_3084 | Not Available | Positive | 3402824 - 3403135 | 12021.3 |
| transposase dde domain protein | M099_3085 | Not Available | Positive | 3403153 - 3403467 | 12452.5 |
| hypothetical protein | M099_3086 | Not Available | Positive | 3403854 - 3403976 | 4672.02 |
| fic/doc family protein | M099_3087 | Not Available | Positive | 3404262 - 3405107 | 32992.6 |
| hypothetical protein | M099_3088 | Not Available | Positive | 3405263 - 3405823 | 21215.1 |
| hypothetical protein | M099_3089 | Not Available | Positive | 3406144 - 3406248 | 3647.59 |
| glycosyl hydrolases 28 family protein | M099_3090 | Not Available | Positive | 3406249 - 3406753 | 18915.7 |
| transposase, mutator family protein | M099_3091 | Not Available | Positive | 3406906 - 3408138 | 46997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

