Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0283 | Not Available | Positive | 309091 - 310305 | 45689.1 |
| glycosyl hydrolases 43 family protein | M099_0284 | Not Available | Positive | 310319 - 311983 | 61585.8 |
| hypothetical protein | M099_0285 | Not Available | Positive | 312956 - 313072 | 4650.56 |
| hypothetical protein | M099_0286 | Not Available | Negative | 313489 - 315000 | 57633.2 |
| starch-binding associating with outer membrane family protein | M099_0287 | Not Available | Negative | 315146 - 316783 | 62578.4 |
| tonb-linked outer membrane, susc/raga family protein | M099_0288 | Not Available | Negative | 316794 - 320063 | 121526.0 |
| fecr family protein | M099_0289 | Not Available | Negative | 320330 - 321265 | 36380.6 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_0290 | Not Available | Negative | 321368 - 321955 | 22600.9 |
| hypothetical protein | M099_0291 | Not Available | Negative | 322586 - 322759 | 6492.48 |
| thioredoxin family protein | M099_0292 | Not Available | Positive | 322873 - 323358 | 18182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

