Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3072 | Not Available | Positive | 3391377 - 3391622 | 9129.08 |
| reverse transcriptase family protein | M099_3073 | Not Available | Positive | 3392229 - 3393905 | 65374.5 |
| conjugation system atpase, trag family protein | M099_3074 | Not Available | Positive | 3393886 - 3395084 | 45787.1 |
| initiator replication family protein | M099_3075 | Not Available | Positive | 3395156 - 3395502 | 13537.1 |
| hypothetical protein | M099_3076 | Not Available | Positive | 3395577 - 3395903 | 12003.7 |
| hypothetical protein | M099_3077 | Not Available | Negative | 3396207 - 3396512 | 10721.8 |
| hypothetical protein | M099_3078 | Not Available | Negative | 3396833 - 3397393 | 21215.1 |
| tonb-dependent receptor plug domain protein | M099_3079 | Not Available | Positive | 3398007 - 3399630 | 59142.2 |
| sigma-54 interaction domain protein | M099_3080 | Not Available | Negative | 3399631 - 3400259 | 23280.9 |
| hypothetical protein | M099_3081 | Not Available | Positive | 3400270 - 3400401 | 5552.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

