Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | M099_3061 | Not Available | Positive | 3382617 - 3383540 | 35521.1 |
| h+ symporter permease | M099_3062 | Not Available | Positive | 3383567 - 3384826 | 47261.1 |
| zinc-binding dehydrogenase family protein | M099_3063 | Not Available | Positive | 3384849 - 3385868 | 36707.0 |
| marc integral membrane family protein | M099_3064 | Not Available | Negative | 3385941 - 3386585 | 23868.2 |
| phage integrase family protein | M099_3066 | Not Available | Negative | 3387220 - 3387692 | 18341.3 |
| cobq/cobb/mind/para nucleotide binding domain protein | M099_3067 | Not Available | Positive | 3388204 - 3388956 | 28838.8 |
| hypothetical protein | M099_3068 | Not Available | Positive | 3388963 - 3389385 | 16114.7 |
| hypothetical protein | M099_3069 | Not Available | Positive | 3389429 - 3389848 | 15831.5 |
| hypothetical protein | M099_3070 | Not Available | Positive | 3389845 - 3390585 | 27845.2 |
| hypothetical protein | M099_3071 | Not Available | Positive | 3391057 - 3391380 | 12151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

