Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3031 | Not Available | Negative | 3341850 - 3342239 | 15271.5 |
| glucokinase family protein | M099_3032 | Not Available | Negative | 3342239 - 3343210 | 34315.4 |
| abc transporter family protein | M099_3033 | Not Available | Positive | 3343363 - 3344082 | 26742.3 |
| ftsx-like permease family protein | M099_3034 | Not Available | Positive | 3344092 - 3345348 | 46624.1 |
| ftsx-like permease family protein | M099_3035 | Not Available | Positive | 3345353 - 3346594 | 45551.9 |
| efflux transporter, rnd family, mfp subunit | M099_3036 | Not Available | Positive | 3346668 - 3347762 | 40051.5 |
| outer membrane efflux family protein | M099_3037 | Not Available | Positive | 3347775 - 3349091 | 49375.2 |
| ahpc/tsa family protein | M099_3038 | Not Available | Negative | 3349375 - 3352032 | 100440.0 |
| hypothetical protein | M099_3039 | Not Available | Negative | 3352159 - 3353112 | 38730.7 |
| s1 domain protein | M099_3040 | Not Available | Negative | 3353236 - 3354069 | 31856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

