Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3011 | Not Available | Negative | 3312674 - 3314056 | 53351.5 |
| hypothetical protein | M099_3012 | Not Available | Negative | 3314132 - 3314366 | 8897.79 |
| hypothetical protein | M099_3013 | Not Available | Negative | 3314580 - 3314720 | 5613.88 |
| tonb-linked outer membrane, susc/raga family protein | M099_3014 | Not Available | Positive | 3315244 - 3318384 | 115565.0 |
| starch-binding associating with outer membrane family protein | M099_3015 | Not Available | Positive | 3318414 - 3320510 | 78397.8 |
| hypothetical protein | M099_3016 | Not Available | Negative | 3320627 - 3320836 | 8236.12 |
| glycosyl hydrolases 28 family protein | M099_3017 | Not Available | Positive | 3321055 - 3321795 | 27536.6 |
| glycosyl hydrolase family 88 family protein | M099_3018 | Not Available | Positive | 3321939 - 3323069 | 43779.9 |
| beta-galactosidase trimerization domain protein | M099_3019 | Not Available | Negative | 3323188 - 3325266 | 79544.5 |
| glycosyl hydrolases 43 family protein | M099_3020 | Not Available | Negative | 3325281 - 3327635 | 89237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

