Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane, susc/raga family protein | M099_2991 | Not Available | Negative | 3288248 - 3291532 | 121437.0 |
| hypothetical protein | M099_2992 | Not Available | Negative | 3291866 - 3293017 | 45288.6 |
| bacterial dna-binding family protein | M099_2993 | Not Available | Positive | 3293331 - 3293969 | 24218.7 |
| peptide-n-glycosidase f, c terminal family protein | M099_2994 | Not Available | Positive | 3294063 - 3295754 | 63140.6 |
| tonb-linked outer membrane, susc/raga family protein | M099_2995 | Not Available | Positive | 3296355 - 3299678 | 121638.0 |
| initiator replication family protein | M099_2996 | Not Available | Positive | 3299679 - 3300199 | 20084.7 |
| sprt-like family protein | M099_2997 | Not Available | Negative | 3300475 - 3301161 | 25794.2 |
| hypothetical protein | M099_2998 | Not Available | Positive | 3301477 - 3301869 | 15672.9 |
| hypothetical protein | M099_2999 | Not Available | Negative | 3301942 - 3302421 | 18703.8 |
| hypothetical protein | M099_3000 | Not Available | Negative | 3302418 - 3302945 | 19959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

