Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | M099_2981 | Not Available | Negative | 3276580 - 3276831 | 9706.84 |
| n-acetylornithine carbamoyltransferase | M099_2982 | Not Available | Negative | 3277692 - 3278657 | 36475.8 |
| glutamate-5-semialdehyde dehydrogenase | M099_2983 | Not Available | Negative | 3278677 - 3279930 | 45523.7 |
| glutamate 5-kinase | M099_2984 | Not Available | Negative | 3279968 - 3281050 | 39536.0 |
| putative haloacid dehalogenase-like hydrolase | M099_2985 | Not Available | Positive | 3281209 - 3281991 | 28780.6 |
| alpha-1,2-mannosidase family protein | M099_2986 | Not Available | Positive | 3282195 - 3284387 | 82184.1 |
| hypothetical protein | M099_2987 | Not Available | Positive | 3284640 - 3284783 | 5331.52 |
| hypothetical protein | M099_2988 | Not Available | Negative | 3284780 - 3285427 | 24679.7 |
| putative lipoprotein | M099_2989 | Not Available | Negative | 3285512 - 3286237 | 26605.6 |
| starch-binding associating with outer membrane family protein | M099_2990 | Not Available | Negative | 3286250 - 3288235 | 76453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

