Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase superfamily protein | M099_0273 | Not Available | Negative | 297929 - 299116 | 44710.8 |
| radical sam superfamily protein | M099_0274 | Not Available | Negative | 299132 - 300058 | 35509.8 |
| prolyl oligopeptidase family protein | M099_0275 | Not Available | Positive | 300145 - 302346 | 83293.8 |
| putative lipoyl synthase | M099_0276 | Not Available | Positive | 302724 - 303299 | 21390.8 |
| hypothetical protein | M099_0277 | Not Available | Negative | 303314 - 303436 | 4666.97 |
| hypothetical protein | M099_0278 | Not Available | Positive | 303840 - 304346 | 19518.7 |
| tetrapyrrole (corrin/porphyrin) methylases family protein | M099_0279 | Not Available | Negative | 304362 - 305066 | 26022.9 |
| gldb family lipoprotein | M099_0280 | Not Available | Negative | 305090 - 306091 | 38833.2 |
| enoyl-(acyl carrier) reductase family protein | M099_0281 | Not Available | Negative | 306099 - 306956 | 31326.5 |
| glycosyl hydrolases 28 family protein | M099_0282 | Not Available | Positive | 307333 - 308952 | 59162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

