Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | M099_0009 | Not Available | Positive | 8436 - 8828 | 15158.8 |
| putative membrane protein insertion efficiency factor | M099_0010 | Not Available | Positive | 8825 - 9046 | 8364.46 |
| tatd related dnase family protein | M099_0011 | Not Available | Positive | 9061 - 9690 | 23968.1 |
| tyrosine--trna ligase | M099_0012 | Not Available | Positive | 9770 - 11062 | 48043.5 |
| peptidase s41 family protein | M099_0013 | Not Available | Negative | 11187 - 14441 | 121942.0 |
| Trna-gln | Not Available | Not Available | Positive | 14576 - 14646 | Not Available |
| hypothetical protein | M099_0015 | Not Available | Positive | 14810 - 15160 | 13836.2 |
| transposase family protein | M099_0016 | Not Available | Positive | 15171 - 15530 | 13473.3 |
| transposase is66 family protein | M099_0017 | Not Available | Positive | 15531 - 16316 | 30330.2 |
| hlyd secretion family protein | M099_0018 | Not Available | Negative | 16537 - 17037 | 18478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

