Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is66 family protein | M099_2951 | Not Available | Negative | 3238221 - 3238573 | 13369.7 |
| dna repair radc domain protein | M099_2952 | Not Available | Negative | 3238574 - 3238911 | 12436.0 |
| glycosyl transferase 2 family protein | M099_2953 | Not Available | Negative | 3238985 - 3239974 | 37604.6 |
| hypothetical protein | M099_2954 | Not Available | Positive | 3239974 - 3240102 | 5096.18 |
| translation elongation factor p | M099_2955 | Not Available | Negative | 3240076 - 3240642 | 21126.5 |
| ribosomal protein l34 | M099_2956 | Not Available | Positive | 3240845 - 3241000 | 6019.34 |
| anaerobic sulfatase maturase | M099_2957 | Not Available | Negative | 3241179 - 3242414 | 48053.5 |
| phosphate-selective porin o and p family protein | M099_2958 | Not Available | Negative | 3242608 - 3243753 | 42892.4 |
| acid phosphatase | M099_2959 | Not Available | Negative | 3243992 - 3244768 | 29161.7 |
| putative lipoprotein | M099_2960 | Not Available | Negative | 3244902 - 3245030 | 4365.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

