Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | M099_2941 | Not Available | Negative | 3232887 - 3233489 | 23063.8 |
| putative 4fe-4s binding domain-containing protein | M099_2942 | Not Available | Negative | 3233490 - 3234096 | 22126.5 |
| hypothetical protein | M099_2943 | Not Available | Positive | 3234073 - 3234201 | 4970.24 |
| relaxase/mobilization nuclease domain protein | M099_2944 | Not Available | Positive | 3235318 - 3235713 | 14804.7 |
| hypothetical protein | M099_2945 | Not Available | Positive | 3235818 - 3235955 | 5150.58 |
| Trna-arg | Not Available | Not Available | Positive | 3236088 - 3236164 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3236182 - 3236258 | Not Available |
| hypothetical protein | M099_2948 | Not Available | Positive | 3236418 - 3236527 | 4282.16 |
| bacterial dnaa family protein | M099_2949 | Not Available | Positive | 3236528 - 3236971 | 16762.6 |
| type iii restriction enzyme, res subunit | M099_2950 | Not Available | Negative | 3237005 - 3238054 | 40021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

