Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | M099_2921 | Not Available | Positive | 3218948 - 3219199 | 9706.84 |
| transposase is66 family protein | M099_2922 | Not Available | Positive | 3219286 - 3220066 | 30212.1 |
| calcineurin-like phosphoesterase family protein | M099_2923 | Not Available | Positive | 3220174 - 3221145 | 37239.9 |
| sodium/calcium exchanger family protein | M099_2924 | Not Available | Positive | 3221212 - 3222171 | 33373.5 |
| hypothetical protein | M099_2925 | Not Available | Positive | 3222246 - 3223382 | 43786.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b domain protein | M099_2926 | Not Available | Positive | 3223413 - 3223621 | 7964.31 |
| transposase is66 family protein | M099_2927 | Not Available | Negative | 3223622 - 3223897 | 10766.8 |
| hypothetical protein | M099_2928 | Not Available | Positive | 3224016 - 3224162 | 5692.07 |
| putative transposase | M099_2929 | Not Available | Positive | 3224235 - 3224476 | 9354.12 |
| tonb-dependent receptor plug domain protein | M099_2930 | Not Available | Negative | 3224477 - 3225744 | 44492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

