Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | M099_2911 | Not Available | Negative | 3206786 - 3207469 | 26125.7 |
| his kinase a domain protein | M099_2912 | Not Available | Negative | 3207474 - 3209012 | 59598.5 |
| putative tonb-dependent receptor | M099_2913 | Not Available | Positive | 3209064 - 3211136 | 79059.4 |
| fe-s metabolism associated domain protein | M099_2914 | Not Available | Negative | 3211172 - 3211600 | 16169.5 |
| leucine aminopeptidase | M099_2915 | Not Available | Negative | 3211612 - 3212616 | 37858.6 |
| glutamine amidotransferase class-i family protein | M099_2916 | Not Available | Negative | 3212685 - 3214442 | 64864.2 |
| phosphate acetyl/butaryl transferase family protein | M099_2917 | Not Available | Positive | 3214525 - 3215433 | 33313.4 |
| butyrate kinase | M099_2918 | Not Available | Positive | 3215532 - 3216596 | 38294.3 |
| hypothetical protein | M099_2919 | Not Available | Negative | 3216734 - 3217984 | 48021.2 |
| hypothetical protein | M099_2920 | Not Available | Positive | 3218344 - 3218466 | 4937.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

