Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2901 | Not Available | Negative | 3200144 - 3200347 | 7696.4 |
| glycosyl hydrolase family 88 family protein | M099_2902 | Not Available | Positive | 3200681 - 3201979 | 49892.6 |
| hypothetical protein | M099_2903 | Not Available | Negative | 3202037 - 3202447 | 15504.0 |
| outer membrane insertion c-terminal signal domain protein | M099_2904 | Not Available | Negative | 3202547 - 3203194 | 24488.9 |
| hypothetical protein | M099_2905 | Not Available | Positive | 3203374 - 3203622 | 9253.75 |
| putative membrane protein | M099_2906 | Not Available | Positive | 3203827 - 3204045 | 8004.92 |
| thioredoxin | M099_2907 | Not Available | Positive | 3204048 - 3204527 | 17688.5 |
| marr family protein | M099_2908 | Not Available | Positive | 3204565 - 3204912 | 13249.2 |
| d-ala-d-ala dipeptidase family protein | M099_2909 | Not Available | Positive | 3204936 - 3205601 | 25264.8 |
| hypothetical protein | M099_2910 | Not Available | Positive | 3205605 - 3206789 | 43869.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

