Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2891 | Not Available | Negative | 3192190 - 3192837 | 24199.5 |
| hypothetical protein | M099_2892 | Not Available | Negative | 3192854 - 3193423 | 21171.9 |
| caax protease self-immunity family protein | M099_2893 | Not Available | Negative | 3193510 - 3194340 | 30257.8 |
| hypothetical protein | M099_2894 | Not Available | Negative | 3194513 - 3194812 | 11054.1 |
| hypothetical protein | M099_2895 | Not Available | Negative | 3194812 - 3195231 | 16015.9 |
| hypothetical protein | M099_2896 | Not Available | Positive | 3195424 - 3195543 | 4360.18 |
| riboflavin biosynthesis protein ribf | M099_2897 | Not Available | Negative | 3195610 - 3196530 | 35285.5 |
| had hydrolase, ia, variant 3 family protein | M099_2898 | Not Available | Negative | 3196530 - 3197144 | 24088.8 |
| calcium-translocating p-type atpase, pmca-type | M099_2899 | Not Available | Negative | 3197172 - 3199802 | 97082.8 |
| Trna-met | Not Available | Not Available | Positive | 3199958 - 3200034 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

