Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2881 | Not Available | Positive | 3178737 - 3178850 | 4172.24 |
| putative cell surface protein | M099_2882 | Not Available | Negative | 3178897 - 3181623 | 97952.1 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_2883 | Not Available | Negative | 3181685 - 3181861 | 6675.22 |
| phage integrase family protein | M099_2884 | Not Available | Negative | 3182029 - 3183147 | 43299.0 |
| holliday junction dna helicase ruvb | M099_2885 | Not Available | Positive | 3183274 - 3184302 | 38022.6 |
| polysaccharide biosynthesis family protein | M099_2886 | Not Available | Positive | 3184306 - 3185751 | 54344.9 |
| hypothetical protein | M099_2887 | Not Available | Positive | 3185754 - 3187118 | 50535.2 |
| peptidase s46 family protein | M099_2888 | Not Available | Positive | 3187123 - 3189249 | 80106.9 |
| dead/deah box helicase family protein | M099_2889 | Not Available | Negative | 3189570 - 3191444 | 70750.0 |
| helix-turn-helix family protein | M099_2890 | Not Available | Negative | 3191706 - 3191891 | 6795.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

