Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding domain protein | M099_2871 | Not Available | Negative | 3163254 - 3164033 | 28519.3 |
| hypothetical protein | M099_2872 | Not Available | Positive | 3164010 - 3164138 | 4970.24 |
| hypothetical protein | M099_2873 | Not Available | Positive | 3165166 - 3168291 | 117178.0 |
| clostripain family protein | M099_2874 | Not Available | Positive | 3168380 - 3169495 | 41980.7 |
| hypothetical protein | M099_2875 | Not Available | Negative | 3169492 - 3169710 | 8468.36 |
| hypothetical protein | M099_2876 | Not Available | Positive | 3169758 - 3171368 | 62446.3 |
| hypothetical protein | M099_2877 | Not Available | Positive | 3171702 - 3172661 | 35909.6 |
| fimbrillin-a associated anchor s mfa1 and mfa2 family protein | M099_2878 | Not Available | Positive | 3172658 - 3173974 | 47507.9 |
| hypothetical protein | M099_2879 | Not Available | Negative | 3174102 - 3175715 | 60920.4 |
| transposase dde domain protein | M099_2880 | Not Available | Negative | 3177069 - 3178724 | 65290.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

