Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase superfamily protein | M099_2841 | Not Available | Negative | 3123133 - 3123540 | 15657.8 |
| dihydrouridine synthase family protein | M099_2842 | Not Available | Positive | 3123599 - 3124516 | 34775.2 |
| hypothetical protein | M099_2843 | Not Available | Positive | 3125036 - 3126292 | 48865.9 |
| lactaldehyde reductase | M099_2844 | Not Available | Positive | 3126506 - 3127660 | 40917.7 |
| hypothetical protein | M099_2845 | Not Available | Positive | 3127835 - 3128383 | 20857.1 |
| tonb-linked outer membrane, susc/raga family protein | M099_2846 | Not Available | Positive | 3128458 - 3131568 | 114545.0 |
| starch-binding associating with outer membrane family protein | M099_2847 | Not Available | Positive | 3131586 - 3133067 | 55452.8 |
| calcineurin-like phosphoesterase family protein | M099_2848 | Not Available | Positive | 3133090 - 3134094 | 37076.2 |
| hypothetical protein | M099_2849 | Not Available | Positive | 3134102 - 3134227 | 4486.41 |
| hypothetical protein | M099_2850 | Not Available | Negative | 3134253 - 3135518 | 48573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

