Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2821 | Not Available | Negative | 3099874 - 3100059 | 7353.07 |
| tonb-dependent receptor family protein | M099_2822 | Not Available | Positive | 3100341 - 3103109 | 104181.0 |
| calcineurin-like phosphoesterase family protein | M099_2823 | Not Available | Positive | 3103120 - 3104091 | 37239.9 |
| sodium/calcium exchanger family protein | M099_2824 | Not Available | Positive | 3104158 - 3105117 | 33415.6 |
| hypothetical protein | M099_2825 | Not Available | Positive | 3105192 - 3106328 | 43786.0 |
| toprim domain protein | M099_2826 | Not Available | Positive | 3106359 - 3108236 | 70989.7 |
| pantetheine-phosphate adenylyltransferase | M099_2827 | Not Available | Positive | 3108254 - 3108709 | 17350.0 |
| c-terminal processing peptidase family protein | M099_2828 | Not Available | Positive | 3108739 - 3110313 | 59722.3 |
| pap2 superfamily protein | M099_2829 | Not Available | Negative | 3110417 - 3111031 | 22141.1 |
| succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family protein | M099_2830 | Not Available | Positive | 3111261 - 3111908 | 24028.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

