Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2801 | Not Available | Positive | 3065715 - 3065849 | 5005.34 |
| glycosyl hydrolases 43 family protein | M099_2802 | Not Available | Negative | 3065858 - 3068314 | 93996.6 |
| starch-binding associating with outer membrane family protein | M099_2803 | Not Available | Negative | 3068599 - 3070290 | 62953.2 |
| tonb-linked outer membrane, susc/raga family protein | M099_2804 | Not Available | Negative | 3070304 - 3073369 | 113154.0 |
| starch-binding associating with outer membrane family protein | M099_2805 | Not Available | Negative | 3073809 - 3075833 | 76769.4 |
| tonb-linked outer membrane, susc/raga family protein | M099_2806 | Not Available | Negative | 3075849 - 3079121 | 122224.0 |
| his kinase a domain protein | M099_2807 | Not Available | Positive | 3079476 - 3083510 | 153313.0 |
| hypothetical protein | M099_2808 | Not Available | Positive | 3083533 - 3083649 | 3851.74 |
| hypothetical protein | M099_2809 | Not Available | Negative | 3083728 - 3084768 | 40901.9 |
| glycosyl hydrolase family 88 family protein | M099_2810 | Not Available | Negative | 3084910 - 3087225 | 88865.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

