Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | M099_2761 | Not Available | Positive | 3015355 - 3017430 | 78707.6 |
| gtp cyclohydrolase i | M099_2762 | Not Available | Negative | 3017443 - 3018024 | 22209.1 |
| sporulation related domain protein | M099_2763 | Not Available | Negative | 3018041 - 3018499 | 17067.7 |
| triose-phosphate isomerase | M099_2764 | Not Available | Negative | 3018605 - 3019360 | 26875.2 |
| doxx family protein | M099_2765 | Not Available | Negative | 3019391 - 3020692 | 50017.5 |
| hypothetical protein | M099_2766 | Not Available | Negative | 3020682 - 3021224 | 20764.0 |
| lysm domain protein | M099_2767 | Not Available | Negative | 3021338 - 3022228 | 33332.2 |
| nucleoside diphosphate kinase | M099_2768 | Not Available | Negative | 3022251 - 3022715 | 17401.2 |
| atp-dependent dna helicase recg | M099_2769 | Not Available | Negative | 3022936 - 3025032 | 79733.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | M099_2770 | Not Available | Negative | 3025034 - 3025693 | 24371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

