Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | M099_2751 | Not Available | Positive | 3008910 - 3010250 | 50611.4 |
| putative oxidoreductase | M099_2752 | Not Available | Positive | 3010274 - 3011266 | 36721.9 |
| Trna-gly | Not Available | Not Available | Positive | 3011338 - 3011410 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3011427 - 3011514 | Not Available |
| transposase family protein | M099_2755 | Not Available | Negative | 3011618 - 3011902 | 11146.5 |
| hypothetical protein | M099_2756 | Not Available | Negative | 3012508 - 3012648 | 5613.88 |
| hypothetical protein | M099_2757 | Not Available | Positive | 3013103 - 3013222 | 4561.66 |
| putative membrane protein | M099_2758 | Not Available | Positive | 3013237 - 3013731 | 18558.6 |
| winged helix dna-binding domain protein | M099_2759 | Not Available | Positive | 3013742 - 3014032 | 10732.2 |
| lactate/malate dehydrogenase, alpha/beta c-terminal domain protein | M099_2760 | Not Available | Positive | 3014276 - 3015277 | 36087.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

