Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| licd family protein | M099_2721 | Not Available | Negative | 2976748 - 2977545 | 31729.4 |
| nad-dependent glycerol-3-phosphate dehydrogenase family protein | M099_2722 | Not Available | Negative | 2977549 - 2978649 | 41186.0 |
| moba-like ntp transferase domain protein | M099_2723 | Not Available | Negative | 2978646 - 2980451 | 70240.4 |
| glycosyltransferase family 23 | M099_2724 | Not Available | Positive | 2980541 - 2981371 | 31834.5 |
| acyltransferase family protein | M099_2725 | Not Available | Negative | 2981394 - 2982419 | 39504.4 |
| polysaccharide biosynthesis family protein | M099_2726 | Not Available | Negative | 2982419 - 2983855 | 53599.5 |
| methionine--trna ligase | M099_2727 | Not Available | Negative | 2983937 - 2985979 | 77707.9 |
| hypothetical protein | M099_2728 | Not Available | Positive | 2986266 - 2986433 | 6591.64 |
| aaa domain family protein | M099_2729 | Not Available | Negative | 2986435 - 2987973 | 56291.9 |
| ahpc/tsa family protein | M099_2730 | Not Available | Negative | 2987978 - 2989045 | 40431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

