Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2711 | Not Available | Positive | 2967917 - 2968168 | 10083.2 |
| hypothetical protein | M099_2712 | Not Available | Positive | 2968209 - 2968355 | 5655.8 |
| ribosomal protein s15 | M099_2713 | Not Available | Positive | 2968449 - 2968718 | 10364.5 |
| s-ribosylhomocysteinase family protein | M099_2714 | Not Available | Negative | 2968821 - 2969306 | 18487.3 |
| mta/sah nucleosidase | M099_2715 | Not Available | Negative | 2969318 - 2970013 | 25510.5 |
| bacterial membrane yfho family protein | M099_2716 | Not Available | Positive | 2970098 - 2972590 | 93036.4 |
| glycosyl transferase 2 family protein | M099_2717 | Not Available | Negative | 2972616 - 2973362 | 28692.4 |
| glycosyl transferases group 1 family protein | M099_2718 | Not Available | Negative | 2973355 - 2974617 | 47669.5 |
| glycosyl transferases group 1 family protein | M099_2719 | Not Available | Negative | 2974630 - 2975745 | 42944.4 |
| putative methyltransferase fkbm | M099_2720 | Not Available | Negative | 2975718 - 2976734 | 40401.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

