Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases 43 family protein | M099_2681 | Not Available | Negative | 2919837 - 2921702 | 69569.1 |
| hypothetical protein | M099_2682 | Not Available | Positive | 2921684 - 2921797 | 3990.88 |
| bacterial ig-like domain family protein | M099_2683 | Not Available | Negative | 2921794 - 2923572 | 64403.9 |
| starch-binding associating with outer membrane family protein | M099_2684 | Not Available | Negative | 2923597 - 2925348 | 66225.7 |
| tonb-linked outer membrane, susc/raga family protein | M099_2685 | Not Available | Negative | 2925368 - 2928532 | 117113.0 |
| glycoside hydrolase 97 family protein | M099_2686 | Not Available | Negative | 2929016 - 2930944 | 72933.5 |
| his kinase a domain protein | M099_2687 | Not Available | Negative | 2931077 - 2935303 | 161224.0 |
| glycosyl hydrolases 43 family protein | M099_2688 | Not Available | Positive | 2935744 - 2937126 | 52121.0 |
| carbohydrate binding domain protein | M099_2689 | Not Available | Positive | 2937228 - 2939129 | 72466.6 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2690 | Not Available | Negative | 2939932 - 2941494 | 57638.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

