Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0243 | Not Available | Positive | 263864 - 264418 | 20105.3 |
| hypothetical protein | M099_0244 | Not Available | Positive | 264655 - 265212 | 20164.2 |
| hypothetical protein | M099_0245 | Not Available | Positive | 265238 - 265870 | 24210.4 |
| outer membrane beta-barrel domain protein | M099_0246 | Not Available | Positive | 265883 - 266521 | 24661.5 |
| histidine kinase family protein | M099_0247 | Not Available | Positive | 266644 - 267681 | 39964.8 |
| response regulator | M099_0248 | Not Available | Positive | 267674 - 268459 | 30188.5 |
| hypothetical protein | M099_0249 | Not Available | Positive | 268615 - 269454 | 30757.1 |
| n-acetylmuramic acid 6-phosphate etherase | M099_0250 | Not Available | Positive | 269451 - 270287 | 30438.0 |
| hypothetical protein | M099_0251 | Not Available | Positive | 270291 - 270992 | 26282.6 |
| s1 rna binding domain protein | M099_0252 | Not Available | Positive | 271520 - 273316 | 67091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

