Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl synthase, c-terminal domain protein | M099_2671 | Not Available | Negative | 2909430 - 2911160 | 63722.3 |
| thioesterase superfamily protein | M099_2672 | Not Available | Negative | 2911145 - 2911588 | 17306.7 |
| putative flexirubin-type pigment biosynthesis acyl carrier protein | M099_2673 | Not Available | Negative | 2911585 - 2912022 | 16453.2 |
| sam-dependent methyltransferase | M099_2674 | Not Available | Negative | 2912019 - 2913089 | 40604.7 |
| bacterial lipid a biosynthesis acyltransferase family protein | M099_2675 | Not Available | Negative | 2913103 - 2913987 | 34491.1 |
| phosphopantetheine attachment site family protein | M099_2676 | Not Available | Negative | 2913987 - 2914238 | 9584.45 |
| beta-ketoacyl synthase, c-terminal domain protein | M099_2677 | Not Available | Negative | 2914260 - 2915489 | 44255.6 |
| short chain dehydrogenase family protein | M099_2678 | Not Available | Negative | 2915497 - 2916225 | 26466.9 |
| aromatic amino acid lyase family protein | M099_2679 | Not Available | Negative | 2916222 - 2917754 | 57564.6 |
| cysteine--trna ligase | M099_2680 | Not Available | Negative | 2917981 - 2919462 | 56306.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

