Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpgli family protein | M099_2661 | Not Available | Positive | 2897197 - 2897997 | 31269.2 |
| glpgli family protein | M099_2662 | Not Available | Positive | 2898004 - 2898858 | 33292.4 |
| cna b-type domain protein | M099_2663 | Not Available | Positive | 2898918 - 2901479 | 98352.1 |
| glpgli family protein | M099_2664 | Not Available | Positive | 2901861 - 2902670 | 32083.4 |
| tonb dependent receptor family protein | M099_2665 | Not Available | Positive | 2902675 - 2905284 | 99786.6 |
| polysaccharide deacetylase family protein | M099_2666 | Not Available | Negative | 2905315 - 2905965 | 25001.0 |
| kila-n domain protein | M099_2667 | Not Available | Negative | 2906055 - 2906909 | 33301.9 |
| beta-ketoacyl synthase, n-terminal domain protein | M099_2668 | Not Available | Negative | 2907023 - 2907976 | 35293.5 |
| beta-ketoacyl synthase, c-terminal domain protein | M099_2669 | Not Available | Negative | 2907980 - 2909170 | 42119.2 |
| phosphopantetheine attachment site family protein | M099_2670 | Not Available | Negative | 2909167 - 2909424 | 9574.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

