Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphofructokinase family protein | M099_2631 | Not Available | Negative | 2861731 - 2862648 | 32643.4 |
| gh3 auxin-responsive promoter family protein | M099_2632 | Not Available | Positive | 2862946 - 2864394 | 55329.3 |
| bacterial ig-like domain protein | M099_2633 | Not Available | Positive | 2864399 - 2866321 | 73414.4 |
| hypothetical protein | M099_2634 | Not Available | Positive | 2866318 - 2867127 | 31356.0 |
| hypothetical protein | M099_2635 | Not Available | Negative | 2867216 - 2868037 | 30751.9 |
| sensory box protein | M099_2636 | Not Available | Positive | 2868284 - 2870659 | 91141.6 |
| hypothetical protein | M099_2637 | Not Available | Negative | 2870777 - 2871352 | 21488.1 |
| amp-binding enzyme family protein | M099_2638 | Not Available | Negative | 2871403 - 2872698 | 49505.5 |
| 6-aminopenicillanic acid acyl-transferase family protein | M099_2639 | Not Available | Negative | 2872700 - 2874364 | 63173.5 |
| fad binding domain protein | M099_2640 | Not Available | Negative | 2874357 - 2875847 | 56679.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

