Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acyl-carrier-protein synthase ii | M099_2621 | Not Available | Positive | 2843186 - 2844451 | 44849.9 |
| ribonuclease iii | M099_2622 | Not Available | Positive | 2844529 - 2845380 | 32003.2 |
| hypothetical protein | M099_2623 | Not Available | Negative | 2845410 - 2845535 | 4830.99 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2624 | Not Available | Negative | 2845525 - 2847078 | 57826.6 |
| raffinose synthase/seed inhibition sip1 family protein | M099_2625 | Not Available | Negative | 2847097 - 2849172 | 78596.0 |
| putative exported fucosidase | M099_2626 | Not Available | Negative | 2849179 - 2850531 | 51346.7 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2627 | Not Available | Negative | 2850568 - 2852004 | 55068.7 |
| starch-binding associating with outer membrane family protein | M099_2628 | Not Available | Negative | 2852241 - 2854289 | 77665.2 |
| tonb-linked outer membrane, susc/raga family protein | M099_2629 | Not Available | Negative | 2854302 - 2857469 | 118099.0 |
| his kinase a domain protein | M099_2630 | Not Available | Positive | 2857654 - 2861721 | 154508.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

