Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase 92 family protein | M099_2601 | Not Available | Negative | 2823387 - 2824211 | 32424.6 |
| glycosyl transferase 2 family protein | M099_2602 | Not Available | Negative | 2824526 - 2825425 | 34448.6 |
| lipopolysaccharide kinase family protein | M099_2603 | Not Available | Negative | 2825440 - 2826192 | 29433.6 |
| hypothetical protein | M099_2604 | Not Available | Negative | 2826208 - 2826924 | 27429.8 |
| udp-galactopyranose mutase | M099_2605 | Not Available | Negative | 2827008 - 2828114 | 42916.6 |
| bacterial lipid a biosynthesis acyltransferase family protein | M099_2606 | Not Available | Negative | 2828117 - 2829040 | 37581.7 |
| glycosyltransferase 9 family protein | M099_2607 | Not Available | Negative | 2829041 - 2830072 | 38600.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein | M099_2608 | Not Available | Positive | 2830177 - 2831202 | 38338.9 |
| hypothetical protein | M099_2609 | Not Available | Negative | 2831241 - 2831360 | 4407.02 |
| hypothetical protein | M099_2610 | Not Available | Negative | 2831367 - 2832338 | 36596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

