Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase 2 family protein | M099_2591 | Not Available | Positive | 2811647 - 2812594 | 36580.4 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_2592 | Not Available | Negative | 2812625 - 2814652 | 77422.9 |
| glycosyl transferase 2 family protein | M099_2593 | Not Available | Negative | 2814831 - 2815820 | 38644.7 |
| glycosyl transferases group 1 family protein | M099_2594 | Not Available | Positive | 2816066 - 2817382 | 50502.2 |
| abc transporter family protein | M099_2595 | Not Available | Positive | 2817440 - 2819278 | 68820.3 |
| glycosyl transferase 2 family protein | M099_2596 | Not Available | Positive | 2819280 - 2820212 | 35626.8 |
| hypothetical protein | M099_2597 | Not Available | Positive | 2820608 - 2820727 | 4700.73 |
| hypothetical protein | M099_2598 | Not Available | Positive | 2820752 - 2820913 | 6328.77 |
| glycosyl transferases group 1 family protein | M099_2599 | Not Available | Negative | 2821319 - 2822176 | 33404.7 |
| core-2/i-branching enzyme family protein | M099_2600 | Not Available | Negative | 2822494 - 2823387 | 35490.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

