Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| moba-like ntp transferase domain protein | M099_0233 | Not Available | Negative | 253644 - 254354 | 26296.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | M099_0234 | Not Available | Negative | 254396 - 255496 | 40647.4 |
| hypothetical protein | M099_0235 | Not Available | Negative | 255523 - 256587 | 40606.1 |
| ribosomal rna large subunit methyltransferase n | M099_0236 | Not Available | Negative | 256613 - 257662 | 39554.0 |
| glycosyl transferase 2 family protein | M099_0237 | Not Available | Positive | 257749 - 260220 | 94536.2 |
| spoiid/lytb domain protein | M099_0238 | Not Available | Positive | 260277 - 261593 | 49960.9 |
| major facilitator superfamily protein | M099_0239 | Not Available | Positive | 261651 - 262925 | 47720.5 |
| hypothetical protein | M099_0240 | Not Available | Negative | 263048 - 263164 | 4162.09 |
| hypothetical protein | M099_0241 | Not Available | Positive | 263187 - 263312 | 4826.98 |
| hypothetical protein | M099_0242 | Not Available | Negative | 263498 - 263632 | 5223.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

