Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl tripeptidyl peptidase | M099_2571 | Not Available | Negative | 2785040 - 2787253 | 83566.4 |
| hypothetical protein | M099_2572 | Not Available | Negative | 2787260 - 2788708 | 56204.3 |
| putative membrane protein | M099_2573 | Not Available | Positive | 2789018 - 2789140 | 4662.98 |
| hypothetical protein | M099_2574 | Not Available | Negative | 2789220 - 2789411 | 7388.35 |
| bacterial transferase hexapeptide family protein | M099_2575 | Not Available | Negative | 2789562 - 2790470 | 32813.2 |
| hypothetical protein | M099_2576 | Not Available | Positive | 2790580 - 2790708 | 4799.93 |
| ribonuclease r | M099_2577 | Not Available | Negative | 2790771 - 2792918 | 81953.4 |
| cation diffusion facilitator transporter family protein | M099_2578 | Not Available | Positive | 2793049 - 2793951 | 32965.4 |
| short chain dehydrogenase family protein | M099_2579 | Not Available | Positive | 2793962 - 2795008 | 40078.3 |
| pap2 superfamily protein | M099_2580 | Not Available | Positive | 2794999 - 2795976 | 37786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

