Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_2561 | Not Available | Negative | 2771616 - 2775020 | 129153.0 |
| abc transporter family protein | M099_2562 | Not Available | Negative | 2775481 - 2776248 | 28695.6 |
| periplasmic solute binding family protein | M099_2563 | Not Available | Negative | 2776258 - 2777097 | 31487.2 |
| hypothetical protein | M099_2564 | Not Available | Positive | 2777128 - 2777250 | 4726.99 |
| bacterial regulatory helix-turn-helix s, arac family protein | M099_2565 | Not Available | Positive | 2777838 - 2778335 | 19135.2 |
| putative lipoprotein | M099_2566 | Not Available | Positive | 2778393 - 2781275 | 106018.0 |
| s-adenosyl-l-methionine-dependent methyltransferase family protein | M099_2567 | Not Available | Negative | 2781672 - 2782355 | 26063.9 |
| putative membrane protein | M099_2568 | Not Available | Negative | 2782360 - 2782569 | 7718.94 |
| putative membrane protein | M099_2569 | Not Available | Negative | 2782802 - 2783707 | 34771.5 |
| phosphoribosylamine--glycine ligase | M099_2570 | Not Available | Negative | 2783756 - 2785024 | 45609.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

