Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain protein | M099_2541 | Not Available | Positive | 2743082 - 2745487 | 89604.9 |
| prolyl oligopeptidase family protein | M099_2542 | Not Available | Positive | 2745499 - 2747742 | 85800.0 |
| hypothetical protein | M099_2543 | Not Available | Negative | 2747802 - 2747915 | 4396.3 |
| tonb-linked outer membrane, susc/raga family protein | M099_2544 | Not Available | Positive | 2748299 - 2751607 | 121648.0 |
| starch-binding associating with outer membrane family protein | M099_2545 | Not Available | Positive | 2751620 - 2753659 | 76706.6 |
| putative lipoprotein | M099_2546 | Not Available | Positive | 2753679 - 2755988 | 86346.0 |
| hypothetical protein | M099_2547 | Not Available | Negative | 2756105 - 2756269 | 6442.87 |
| pectate lyase | M099_2548 | Not Available | Positive | 2756257 - 2758398 | 81712.3 |
| hypothetical protein | M099_2549 | Not Available | Positive | 2758463 - 2759770 | 49466.1 |
| hypothetical protein | M099_2550 | Not Available | Negative | 2759822 - 2761546 | 67866.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

